Changing effects of energy and water on the richness distribution pattern of the Quercus genus in China.

Climate varies along geographic gradients, causing spatial variations in the effects of energy and water on species richness and the explanatory power of different climatic factors. Species of the Quercus genus are important tree species in China with high ecological and socioeconomic value. To detect whether the effects of energy and water on species richness change along climatic gradients, this study built geographically weighted regression models based on species richness and climatic data. Variation partition analysis and hierarchical partitioning analysis were used to further explore the main climatic factors shaping the richness distribution pattern of Quercus in China. The results showed that Quercus species were mainly distributed in mountainous areas of southwestern China. Both energy and water were associated with species richness, with global slopes of 0.17 and 0.14, respectively. The effects of energy and water on species richness gradually increased as energy and water in the environment decreased. The interaction between energy and water altered the effect of energy, and in arid regions, the effects of energy and water were relatively stronger. Moreover, energy explained more variation in species richness in both the entire study area (11.5%) and different climate regions (up to 19.4%). The min temperature of coldest month was the main climatic variable forming the richness distribution pattern of Quercus in China. In conclusion, cold and drought are the critical climatic factors limiting the species richness of Quercus, and climate warming will have a greater impact in arid regions. These findings are important for understanding the biogeographic characteristics of Quercus and conserving biodiversity in China.

Dynamics of the distribution of invasive alien plants (Asteraceae) in China under climate change.

Climate change and biological invasions pose significant threats to the conservation of biodiversity and the provision of ecosystem services. With the rapid development of international trade and economy, China has become one of the countries most seriously affected by invasive alien plants (IAPs), especially the Asteraceae IAPs. For this end, we selected occurrence data of 31 Asteraceae IAPs and 33 predictor variables to explore the distribution pattern under current climate using MaxEnt model. Based on future climate data, the changes in distribution dynamics of Asteraceae IAPs were predicted under two time periods (2041-2060 and 2081-2100) and three climate change scenarios (SSP126, SSP245 and SSP585). The results indicated that the potential distribution of IAPs was mainly in the southeast of China under current climate. Climatic variables, including precipitation of coldest quarter (BIO19), temperature annual range (BIO07) and annual precipitation (BIO12) were the main factors affecting the potential distribution. Besides, human footprint (HFP), population (POP) and soil moisture (SM) also had a great contribution for shaping the distribution pattern. With climate change, the potential distribution of IAPs would shift to the northwest and expand. It would also accelerate the expansion of most Asteraceae IAPs in China. The results of our study can help to understand the dynamics change of distributions of Asteraceae IAPs under climate change in advance so that early strategies can be developed to reduce the risk and influence of biological invasions.

Genome-Wide Identification and Expression Analysis of the SBP-Box Gene Family in Loquat Fruit Development.

The loquat (Eriobotrya japonica L.) is a special evergreen tree, and its fruit is of high medical and health value as well as having stable market demand around the world. In recent years, research on the accumulation of nutrients in loquat fruit, such as carotenoids, flavonoids, and terpenoids, has become a hotspot. The SBP-box gene family encodes transcription factors involved in plant growth and development. However, there has been no report on the SBP-box gene family in the loquat genome and their functions in carotenoid biosynthesis and fruit ripening. In this study, we identified 28 EjSBP genes in the loquat genome, which were unevenly distributed on 12 chromosomes. We also systematically investigated the phylogenetic relationship, collinearity, gene structure, conserved motifs, and cis-elements of EjSBP proteins. Most EjSBP genes showed high expression in the root, stem, leaf, and inflorescence, while only five EjSBP genes were highly expressed in the fruit. Gene expression analysis revealed eight differentially expressed EjSBP genes between yellow- and white-fleshed fruits, suggesting that the EjSBP genes play important roles in loquat fruit development at the breaker stage. Notably, EjSBP01 and EjSBP19 exhibited completely opposite expression patterns between white- and yellow-fleshed fruits during fruit development, and showed a close relationship with SlCnr involved in carotenoid biosynthesis and fruit ripening, indicating that these two genes may participate in the synthesis and accumulation of carotenoids in loquat fruit. In summary, this study provides comprehensive information about the SBP-box gene family in the loquat, and identified two EjSBP genes as candidates involved in carotenoid synthesis and accumulation during loquat fruit development.

Down-regulation of NCED leads to the accumulation of carotenoids in the flesh of F1 generation of peach hybrid.

Flesh color is an important target trait in peach [Prunus persica (L.) Batsch] breeding. In this study, two white-fleshed peach cultivars were crossed [Changsong Whitepeach (WP-1) × 'Xiacui'], and their hybrid F1 generation showed color segregation of white flesh (BF1) and yellow flesh (HF1). Metabolome analysis revealed that the flesh color segregation in the hybrid F1 generation was related to the carotenoid content. The decrease in ß-carotene and ß-cryptoxanthin in BF1 flesh and increase in ß-cryptoxanthin oleate, rubixanthin caprate, rubixanthin laurate and zeaxanthin dipalmitate in HF1 flesh contributed to their difference in carotenoid accumulation. Transcriptome analysis demonstrated that compared with BF1, HF1 showed significant up-regulation and down-regulation of ZEP and CCD8 at the core-hardening stage, respectively, while significant down-regulation of NCED in the whole fruit development stage. The down-regulation of NCED might inhibit the breakdown of the violaxanthin and its upstream substances and further promote the accumulation of carotenoids, resulting in yellow flesh. Therefore, NCED may be a key gene controlling the fruit color traits of peach. In this study, targeted metabolomics and transcriptomics were used to jointly explore the mechanism controlling the fruit color of peach, which may help to identify the key genes for the differences in carotenoid accumulation and provide a reference for the breeding of yellow-fleshed peach.

Photosynthetic Efficiency and Glyco-Metabolism Changes in Artificial Triploid Loquats Contribute to Heterosis Manifestation.

Previous studies indicated that extensive genetic variations could be generated due to polyploidy, which is considered to be closely associated with the manifestation of polyploid heterosis. Our previous studies confirmed that triploid loquats demonstrated significant heterosis, other than the ploidy effect, but the underlying mechanisms are largely unknown. This study aimed to overcome the narrow genetic distance of loquats, increase the genetic variation level of triploid loquats, and systematically illuminate the heterosis mechanisms of triploid loquats derived from two cross combinations. Here, inter-simple sequence repeats (ISSRs) and simple sequence repeats (SSRs) were adopted for evaluating the genetic diversity, and transcriptome sequencing (RNA-Seq) was performed to investigate gene expression as well as pathway changes in the triploids. We found that extensive genetic variations were produced during the formation of triploid loquats. The polymorphism ratios of ISSRs and SSRs were 43.75% and 19.32%, respectively, and almost all their markers had a PIC value higher than 0.5, suggesting that both ISSRs and SSRs could work well in loquat assisted breeding. Furthermore, our results revealed that by broadening the genetic distance between the parents, genetic variations in triploids could be promoted. Additionally, RNA-Seq results suggested that numerous genes differentially expressed between the triploids and parents were screened out. Moreover, KEGG analyses revealed that "photosynthetic efficiency" and "glyco-metabolism" were significantly changed in triploid loquats compared with the parents, which was consistent with the results of physiological indicator analyses, leaf micro-structure observations, and qRT-PCR validation. Collectively, our results suggested that extensive genetic variations occurred in the triploids and that the changes in the "photosynthetic efficiency" as well as "glyco-metabolism" of triploids might have further resulted in heterosis manifestation in the triploid loquats.

A sandstorm extreme event from the Yellow River Basin in March 2021: Accurate identification and driving cause.

Sandstorm is a natural meteorological disaster that can appear suddenly and is often extremely destructive. In areas with small number of meteorological observation stations, it is difficult to effectively monitor sandstorm. Moderate Resolution Imaging Spectroradiometer (MODIS) data have the characteristics of high resolution and wide coverage, making it possible to monitor dynamic weather changes in a large area over time, and such data are widely used in sandstorm monitoring. The purpose of our research was to achieve a more accurate identification of sandstorm according to the differences in reflectance and brightness temperature between sandstorm and other phenomena, and to better understand the formation, movement track and driving cause of sandstorm extreme event. Taking the intense sandstorm event that occurred in the Yellow River Basin from March 13th to 18th, 2021 as an example, sandstorm process was analyzed based on MODIS data and meteorological monitoring data. The threshold of Normalized Difference Dust Index (NDDI) and Normalized Brightness Temperature Dust Index (NBTDI) realized accurate sandstorm monitoring and quantification of the sandstorm coverage areas. Sandstorm covered 32.89 % and 37.23 % of the total areas of the Yellow River Basin on March 15th and 16th, 2021, respectively. In addition, observation data from 22 meteorological stations also provided an important reference for further understanding of sandstorm weather. The intense sandstorm event in China on March 15th, 2021 originated from the dust in Mongolia. This sandstorm event caused great damage to the ecological environment and caused serious losses to people's lives and properties. This study improved the monitoring of sandstorm by remote sensing technology, and the results had importance for the long-term monitoring and prevention of sandstorm.

Comparative transcriptome and physiological analyses reveal key factors in the tolerance of peach rootstocks to iron deficiency chlorosis.

Iron (Fe) deficiency chlorosis (IDC) is a major nutritional disorder in fruit trees grown on calcareous soils. As a peach rootstock, 'GF677' (Prunus dulcis Miller × P. persica (L.) Batsch) has great tolerance to Fe deficiency, but the molecular mechanisms of 'GF677' that support the process of iron deficiency chlorosis tolerance are still unknown. In this study, the key factors for differential iron deficiency chlorosis tolerance in two contrasting rootstocks (IDC-tolerant: 'GF677', IDC-susceptible: 'Maotao' (P. persica)) were investigated. 'GF677' exhibited greater Fe transfer and accumulation capacities when compared with 'Maotao', and the analysis of photosynthetic pigments, related precursors, and antioxidative enzyme activities further demonstrated that 'GF677' was more tolerant to IDC when compared with 'Maotao'. Furthermore, comparative transcriptome analysis revealed differential expression in many genes involved in iron transport and storage, and in photosynthesis recovery. These results suggest that the greater IDC tolerance of 'GF677' can be attributed to the greater expression of key genes related to specific Fe transporters, defense systems, photosynthetic recovery, and/or special proteins. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s13205-021-03046-6.

Peach-Morchella intercropping mode affects soil properties and fungal composition.

OBJECTIVE: This study aims to explore a three-dimensional planting mode in orchards and provide theoretical basis for the efficient peach-Morchella planting and soil management after Morchella cultivation. METHODS: Next-generation sequencing was performed to investigate the variations in soil physicochemical properties, enzyme activities and fungal composition under peach-Morchella intercropping for one year and two years, by using the soil without peach-Morchella intercropping as the control group. RESULTS: Peach-Morchella intercropping decreased the soil bulk density, and significantly increased the maximum field capacity, non-capillary porosity and total porosity, organic matter, available potassium and available zinc, which together improved soil structure and soil fertility. Besides, the intercropping mode obviously enhanced soil enzyme activities and mineral absorption and transformation in peach orchard soils. The intercropping also resulted in a decline of soil fungal diversity, and the 2-year soil samples were of higher abundance of Zygomycota. More importantly, peach-Morchella intercropping elevated the yields of both peach and Morchella, bringing about obviously higher economic benefits. CONCLUSION: Continuous peach-Morchella intercropping improves the soil structure and fertility while decreases soil fungal diversity, which can contribute to greater economic benefits of the peach orchard. Our findings shed new light on the intercropping-fungus-soil relationship, and may facilitate the further development of peach-Morchella intercropping.

The effect of climate change on the richness distribution pattern of oaks (Quercus L.) in China.

Increased concentration of greenhouse gases in the air is acknowledged as one of the main reason for observed global climatic change. This phenomenon significantly affects the species geographical distribution, and changes their richness distribution pattern. Oak (Quercus L.) is an important component of forests in China, and it has significant ecological value. Based on the distribution data of 35 species and 19 bioclimatic variables, the potential richness distribution of Quercus L. in China was predicted using the MaxEnt model under present climatic conditions and three different emission scenarios in the years 2050 and 2070 with six General Circulation Models (GCMs). The results revealed that Quercus L. at present was primarily distributed in the mountainous areas of southwestern China. The simulations indicated that climate change could affect the spatial pattern of the richness distribution, and if climate change intensified, its impact would gradually increase. As temperatures rise, the distribution of Quercus L. was predicted to be concentrated, and suitable areas of certain species would contract. These species may migrate to high altitudes or high latitudes. The high percentage of species lost is the reason for the higher turnover values in the mountainous areas, while other regions are mostly be influenced by the high percentage of species gained associated with the northward shift of species. Predicting changes in the richness distribution pattern of Quercus L. as a result of climate change can help us understand the biogeography of Quercus L. and enact conservation strategies to minimize the impacts of climate change.

Comparative transcriptome analysis reveals gene expression differences between two peach cultivars under saline-alkaline stress.

BACKGROUND: Saline-alkaline stress is a major abiotic stress that is harmful to plant growth worldwide. Two peach cultivars (GF677 and Maotao) display distinct phenotypes under saline-alkaline stress. The molecular mechanism explaining the differences between the two cultivars is still unclear. RESULTS: In the present study, we systematically analysed the changes in GF677 and Maotao leaves upon saline-alkaline stress by using cytological and biochemical technologies as well as comparative transcriptome analysis. Transmission electron microscopy (TEM) observations showed that the structure of granum was dispersive in Maotao chloroplasts. The biochemical analysis revealed that POD activity and the contents of chlorophyll a and chlorophyll b, as well as iron, were notably decreased in Maotao. Comparative transcriptome analysis detected 881 genes with differential expression (including 294 upregulated and 587 downregulated) under the criteria of |log2 Ratio| ≥ 1 and FDR ≤0.01. Gene ontology (GO) analysis showed that all differentially expressed genes (DEGs) were grouped into 30 groups. MapMan annotation of DEGs showed that photosynthesis, antioxidation, ion metabolism, and WRKY TF were activated in GF677, while cell wall degradation, secondary metabolism, starch degradation, MYB TF, and bHLH TF were activated in Maotao. Several iron and stress-related TFs (ppa024966m, ppa010295m, ppa0271826m, ppa002645m, ppa010846m, ppa009439m, ppa008846m, and ppa007708m) were further discussed from a functional perspective based on the phylogenetic tree integration of other species homologues. CONCLUSIONS: According to the cytological and molecular differences between the two cultivars, we suggest that the integrity of chloroplast structure and the activation of photosynthesis as well as stress-related genes are crucial for saline-alkaline resistance in GF677. The results presented in this report provide a theoretical basis for cloning saline-alkaline tolerance genes and molecular breeding to improve saline-alkaline tolerance in peach.

Citric acid treatment reduces decay and maintains the postharvest quality of peach (Prunus persica L.) fruit.

Peaches are easily perishable fruit, and their quality is quickly lost after harvest. In this study, "Hujingmilu" peach (Prunus persica L.) fruit was treated with citric acid (CA) and stored at 20°C for 15 days. Fruit decay and quality were evaluated during the storage period. Compared with the control, CA treatment did not inhibit climacteric ethylene release, but CA was significantly effective at maintaining firmness, inhibiting decay, and preventing a decrease in titration acid (TA). CA treatment inhibited the increase in total soluble solids (TSS), sucrose, and fructose in the first week after fruit harvest, but then their content was significantly higher in CA-treated fruits than that in the control group. The decrease in malic acid and citric acid was significantly prevented by CA treatment. During storage, the concentrations of C6 volatile compounds decreased rapidly whereas lactones sharply increased, and the concentrations of δ-decalactone, γ-decalactone, and γ-dodecalactone were found to be significantly high in CA fruits compared with the control after the eighth day of storage (p < .05). Similarly, higher contents of chlorogenic acid, neochlorogenic acid, catechin, and L-epicatechin were maintained in fruits treated with CA during the same storage period (p < .05). Our findings suggest that treatment with 10 g/L citric acid can reduce postharvest decay and effectively maintain the texture, flavor, and nutrition quality of peach fruit.

A systematic review of anxiety across smoking stages in adolescents and young adults.

BACKGROUND: In adolescence and young adults, inconsistence of the association between anxiety and smoking remains to be investigated and clarified. The aim of this study is investigated and clarified the association between anxiety and smoking stages in adolescence and young adults. METHODS: The data on the causal influence of anxiety on smoking in adolescents and young adults aged 14 to 25 years old was retrieved from electronic databases. RESULTS: Nineteen of 668 articles were subjected to a systematic review. Definitional differences with respect to smoking stages constrained homogeneity across the nineteen analyzed reports. Anxiety appears to play a more consistent risk role for nicotine dependent (ND) smokers than for non-nicotine dependent (non-ND) regular or daily smokers. Anxious non-ND smokers are at higher risk to become nicotine dependent. CONCLUSIONS: A ununified definition of smoking stages is responsible for the production of inconsistent results. The analysis reinforced anxiety as a significant risk factor for smoking in one's lifetime. Anxious non-ND smokers are the key target for interventions aimed at preventing nicotine dependence and smoking-related health problems.

Outcome of a session of extracorporeal shock wave lithotripsy before endoscopic retrograde cholangiopancreatography for problematic and large common bile duct stones.

AIM: To compare the efficacy of a session of extracorporeal shock wave lithotripsy (ESWL) before endoscopic retrograde cholangiopancreatography (ERCP) vs ERCP only for problematic and large common bile duct (CBD) stones. METHODS: Adult patients with CBD stones for whom initial ERCP was unsuccessful because of the large size of CBD stones were identified. The patients were randomized into two groups, an "ESWL + ERCP group" and an "ERCP-only" group. For ESWL + ERCP cases, ESWL was performed prior to ERCP. Clearance of the CBD, complications related to the ESWL/ERCP procedure, frequency of mechanical lithotripsy use and duration of the ERCP procedure were evaluated in both groups. RESULTS: There was no significant difference in baseline characteristics between the two groups. A session of ESWL before ERCP compared with ERCP only resulted in similar outcomes in terms of successful stone removal within the first treatment session (74.2% vs 71.0%, P = 0.135), but a higher clearance rate within the second treatment session (84.4% vs 51.6%, P = 0.018) and total stone clearance (96.0% vs 86.0%, P = 0.029). Moreover, ESWL prior to ERCP not only reduced ERCP procedure time (43 ± 21 min vs 59 ± 28 min, P = 0.034) and the rate of mechanical lithotripsy use (20% vs 30%, P = 0.025), but also raised the clearance rate of extremely large stones (80.0% vs 40.0%, P = 0.016). Post-ERCP complications were similar for the two groups. CONCLUSION: Based on the higher rate of successful stone removal and minimal complications, ESWL prior to ERCP appears to be a safe and effective treatment for the endoscopic removal of problematic and large CBD stones.

Using cholecystokinin to facilitate endoscopic clearance of large common bile duct stones.

AIM: To evaluate the effect of cholecystokinin (CCK) during extracorporeal shockwave lithotripsy (ESWL) in the clearance of common bile duct (CBD) stones in endoscopic retrograde cholangiopancreatography (ERCP). METHODS: Between January 2007 and September 2012, patients with large CBD stones who were treated with ESWL and ERCP were identified retrospectively. Patients were randomized in equal numbers to cholecystokinin (CCK) and no CCK groups. For each CCK case, a dose (3 ng/kg per min for 10 min) of sulfated octapeptide of CCK-8 was administered intravenously near the beginning of ESWL. ERCP was performed 4 h after a session of ESWL. The clearance rate of the CBD was assessed between the two groups. RESULTS: A total of 148 consecutive cases (CCK group: 74, no CCK group: 74) were tallied. Overall there were 234 ESWLs and 228 ERCPs in the 148 cases. The use of CCK showed a significantly higher rate of successful stone removal in the first ESWL/ERCP procedure (71.6% vs 55.4%, P = 0.035), but resulted in similar outcomes in the second (42.8% vs 39.4%) and third (41.7% vs 40.0%) sessions, as well as total stone clearance (90.5% vs 83.8%). The use of mechanical lithotripsy was reduced in the CCK group (6.8% vs 17.6%, P = 0.023), and extremely large stone (≥ 30 mm) removal was higher in the CCK group (72.7% vs 41.7%, P = 0.038). CONCLUSION: CCK during ESWL can aid with the clearance of CBD stones in the first ESWL/ERCP session. Mechanical lithotripsy usage was reduced and the extremely large stone (≥ 30 mm) clearance rate can be raised.

A near-infrared fluorescent probe for monitoring ozone and imaging in living cells.

A near-infrared fluorescent probe (Trp-Cy) for endogenous ozone is presented, which exhibited a large stokes shift about 140 nm and a rapid fluorescence response to ozone with high selectivity and sensitivity.

Blue-light-dependent interaction of cryptochrome 1 with SPA1 defines a dynamic signaling mechanism.

Cryptochromes (CRYs) are blue-light photoreceptors that mediate various light responses in plants and animals. The signaling mechanism by which CRYs regulate light responses involves their physical interactions with COP1. Here, we report that CRY1 interacts physically with SPA1 in a blue-light-dependent manner. SPA acts genetically downstream from CRYs to regulate light-controlled development. Blue-light activation of CRY1 attenuates the association of COP1 with SPA1 in both yeast and plant cells. These results indicate that the blue-light-triggered CRY1-SPA1 interaction may negatively regulate COP1, at least in part, by promoting the dissociation of COP1 from SPA1. This interaction and consequent dissociation define a dynamic photosensory signaling mechanism.